{"id":755,"date":"2015-09-21T18:21:45","date_gmt":"2015-09-21T17:21:45","guid":{"rendered":"http:\/\/wp.cs.ucl.ac.uk\/gift-surg-intranet\/?p=755"},"modified":"2015-09-21T18:21:45","modified_gmt":"2015-09-21T17:21:45","slug":"phd-meeting-michael-e-20150921","status":"publish","type":"post","link":"https:\/\/wp1.cs.ucl.ac.uk\/gift-surg-intranet\/2015\/09\/21\/phd-meeting-michael-e-20150921\/","title":{"rendered":"PhD meeting &#8212; Michael E. &#8212; 20150921"},"content":{"rendered":"<p align=\"center\"><span style=\"font-family: Arial,sans-serif\"><span style=\"font-size: large\"><b>Meeting Minutes<\/b><\/span><\/span><\/p>\n<p align=\"center\">September 21, 2015<\/p>\n<p align=\"left\"><span style=\"font-family: Arial,sans-serif\"><b>1. Attendees:<\/b><\/span><\/p>\n<ul>\n<li>\n<p align=\"left\"><span style=\"font-family: Arial,sans-serif\">Tom Vercauteren<\/span><\/p>\n<\/li>\n<li>\n<p align=\"left\"><span style=\"font-family: Arial,sans-serif\">Michael Ebner<\/span><\/p>\n<\/li>\n<\/ul>\n<p align=\"left\"><span style=\"font-family: Arial,sans-serif\"><b>2. Discussed Topics:<\/b><\/span><\/p>\n<ul>\n<li>\n<p align=\"left\"><span style=\"font-family: Arial,sans-serif\">Registration algorithm:<\/span><\/p>\n<ul>\n<li>\n<p align=\"left\"><span style=\"font-family: Arial,sans-serif\">Discussion of current results<\/span><\/p>\n<\/li>\n<li>\n<p align=\"left\"><span style=\"font-family: Arial,sans-serif\">Conversion between (Simple)ITK and Nifti-header representation<\/span><\/p>\n<\/li>\n<li>\n<p align=\"left\"><span style=\"font-family: Arial,sans-serif\">Expansion of 2D in-plane registration transform to 3D<\/span><\/p>\n<\/li>\n<li>\n<p align=\"left\"><span style=\"font-family: Arial,sans-serif\">Data structure and affine transformations to handle orthogonal stacks of slices<\/span><\/p>\n<\/li>\n<\/ul>\n<\/li>\n<\/ul>\n<p align=\"left\"><span style=\"font-family: Arial,sans-serif\"><b>3. Action Items:<\/b><\/span><\/p>\n<ul>\n<li>\n<p align=\"left\"><span style=\"font-family: Arial,sans-serif\">Registration Algorithm<\/span><\/p>\n<ul>\n<li>\n<p align=\"left\"><span style=\"font-family: Arial,sans-serif\">In-plane registration<\/span><\/p>\n<\/li>\n<li>\n<p align=\"left\"><span style=\"font-family: Arial,sans-serif\">Proper handling of orthogonal stacks within SimpleITK<\/span><\/p>\n<\/li>\n<li>\n<p align=\"left\"><span style=\"font-family: Arial,sans-serif\">2D to 3D registration<\/span><\/p>\n<\/li>\n<\/ul>\n<\/li>\n<li>\n<p align=\"left\"><span style=\"font-family: Arial,sans-serif\">Kainz IRTK: <\/span><\/p>\n<ul>\n<li>\n<p align=\"left\"><span style=\"font-family: Arial,sans-serif\">Build on cluster<\/span><\/p>\n<\/li>\n<li>\n<p align=\"left\"><span style=\"font-family: Arial,sans-serif\">Run on test data<\/span><\/p>\n<\/li>\n<li>\n<p align=\"left\"><span style=\"font-family: Arial,sans-serif\">Share information of edited code on github<\/span><\/p>\n<\/li>\n<\/ul>\n<\/li>\n<li>\n<p align=\"left\"><span style=\"font-family: Arial,sans-serif\">MICCAI fetal challenge: Assess similarity of fetal images and kidney images to find meaningful indicators suitable for evaluating algorithms applied on both<\/span><\/p>\n<\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>Meeting Minutes September 21, 2015 1. Attendees: Tom Vercauteren Michael Ebner 2. Discussed Topics: Registration algorithm: Discussion of current results Conversion between (Simple)ITK and Nifti-header representation Expansion of 2D in-plane registration transform to 3D Data structure and affine transformations to<\/p>\n","protected":false},"author":45,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[4],"tags":[],"class_list":["post-755","post","type-post","status-publish","format-standard","hentry","category-electronic-journal"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.3 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>PhD meeting - Michael E. - 20150921 - GIFT-Surg Intranet<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/wp1.cs.ucl.ac.uk\/gift-surg-intranet\/2015\/09\/21\/phd-meeting-michael-e-20150921\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"PhD meeting - Michael E. - 20150921 - GIFT-Surg Intranet\" \/>\n<meta property=\"og:description\" content=\"Meeting Minutes September 21, 2015 1. 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